/*
 * Copyright 2006-2018 The MZmine 2 Development Team
 * 
 * This file is part of MZmine 2.
 * 
 * MZmine 2 is free software; you can redistribute it and/or modify it under the terms of the GNU
 * General Public License as published by the Free Software Foundation; either version 2 of the
 * License, or (at your option) any later version.
 * 
 * MZmine 2 is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without
 * even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
 * General Public License for more details.
 * 
 * You should have received a copy of the GNU General Public License along with MZmine 2; if not,
 * write to the Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301
 * USA
 */

package net.sf.mzmine.modules.visualization.histogram;

import java.awt.Window;

import net.sf.mzmine.datamodel.PeakList;
import net.sf.mzmine.datamodel.RawDataFile;
import net.sf.mzmine.main.MZmineCore;
import net.sf.mzmine.parameters.Parameter;
import net.sf.mzmine.parameters.impl.SimpleParameterSet;
import net.sf.mzmine.parameters.parametertypes.IntegerParameter;
import net.sf.mzmine.parameters.parametertypes.MultiChoiceParameter;
import net.sf.mzmine.parameters.parametertypes.WindowSettingsParameter;
import net.sf.mzmine.parameters.parametertypes.selectors.PeakListsParameter;
import net.sf.mzmine.util.ExitCode;

public class HistogramParameters extends SimpleParameterSet {

  public static final PeakListsParameter peakList = new PeakListsParameter(1, 1);

  public static final MultiChoiceParameter<RawDataFile> dataFiles =
      new MultiChoiceParameter<RawDataFile>("Raw data files", "Column of peaks to be plotted",
          new RawDataFile[0]);

  public static final HistogramRangeParameter dataRange = new HistogramRangeParameter();

  public static final IntegerParameter numOfBins =
      new IntegerParameter("Number of bins", "The plot is divides into this number of bins", 10);

  /**
   * Windows size and position
   */
  public static final WindowSettingsParameter windowSettings = new WindowSettingsParameter();

  public HistogramParameters() {
    super(new Parameter[] {peakList, dataFiles, dataRange, numOfBins, windowSettings});
  }

  public ExitCode showSetupDialog(Window parent, boolean valueCheckRequired) {
    PeakList selectedPeaklists[] =
        getParameter(HistogramParameters.peakList).getValue().getMatchingPeakLists();
    RawDataFile dataFiles[];
    if ((selectedPeaklists == null) || (selectedPeaklists.length != 1)) {
      dataFiles = MZmineCore.getProjectManager().getCurrentProject().getDataFiles();
    } else {
      dataFiles = selectedPeaklists[0].getRawDataFiles();
    }
    getParameter(HistogramParameters.dataFiles).setChoices(dataFiles);
    return super.showSetupDialog(parent, valueCheckRequired);
  }

}
